Notes
Slide Show
Outline
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Data Management in Kenya
  • Dan Rosen – Chief of Data Management and Surveillance
  • James Kwach – Chief Data Manager
  • Maurice Ombok – Chief, GIS/GPS Activity
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CDC/KEMRI Field Station Western Kenya
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The  study area is rural, but densely populated.
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Study Area Has Very Intense Malaria Transmission
  • >100 infective bites per year.
  •  Virtually all infants have malaria multiple times in first year of life.
  • Most malaria-related mortality is in first 2 years of life.





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CDC in Kenya
  • Over 600 field staff, entomology and immunology labs.
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The Bednet Project
  • Goal: to see if insecticide-treated bednets can reduce malaria-related mortality in children.
  • Study area : 450 sq km, 125,000 people.
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Demographic Surveillance in Western Kenya.
    • Quarterly Census of approximately 100,000 people.
    • Tracks migration, marriage, mortality, and births.
    • We need population figures to compute rates of disease.
    • Additional components track prevalence of malaria vectors, morbidity, and mortality.


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Demographic Surveillance – data base management
  • We use a modified version of the Population Council’s Household Registration System.
    • www.popcouncil.org/hrs/hrs.html
    • Visual Foxpro-based
      • VF chosen due to common use in developing countries.

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Demographic Surveillance
  • We use a modified version of the Population Council’s Household Registration System.
    • www.popcouncil.org/hrs/hrs.html
    • Visual Foxpro-based
    • Have developed scannable forms for each component.
    • Have also developed a “proof of concept” PDA-based system.



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Data Model for HRS
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How to minimize data processing nightmares?
  • Use PDA’s to collect data.
  • Use scan-ready forms to collect data.
  • Both approaches eliminate the need for data entry.
  • So, we are trying both methods.


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The scan-able form
  • Can scan existing forms or create new ones.
  • Define the attributes of each field/column.
  • Faxed forms can be used at both the form design and data entry stages.
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Data Processing with OCR
  • Uses neural net technology.
  • More structured forms  (one character/box).
  • Many options – automatic coding, table lookups, q/c on scanned images.
  • Forms in Demographic Surveillance are being processed in this way.


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Scanning - Con’s
  • Larger startup cost – roughly $10,000 for the software, computer, and high-speed scanner.
  • Resistance from scientific staff.
  • Proliferation of form versions and associated databases.
    • Each form change = new database.
  • Storage of forms is still a problem.
  • Data not edited at collection phase.


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Scanning - Pro’s
  • Rapid ramp up of projects .
  • Increased speed and accuracy for processing data.
  • Easier staff monitoring and reduced staffing needs for data entry.
  • Cheaper for large number of data collectors.
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A PDA-based data collection system
  • Case study: the GPS/mapping system.
  • Uses no paper collection forms.
  • Collects home construction type, animal ownership, location information.
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GPS mapping/census system.
  • System in use since 1998.
  • New hardware and upgraded software put into place Feb. 2002.
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Components of the system
  • The GPS unit
  • The GPS antenna
  • The Laser Range Finder
  • The PDA/Data Collection Unit
  • The Solar Battery Recharger
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"The GPS antenna"
  • The GPS antenna
  • The GPS unit
  • Serial Cable connects GPS to PDA
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The Laser Range Finder
  • Measures distance from GPS unit to object to be mapped.
  • Digital compass measures the direction.
  • Digital level measures the angle.
  • Software automatically adjusts GPS reading to account for this offset.
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The Solar Battery recharger
  • Keeps PDA batteries charged for all day use.
  • Plugs in the base of the PDA.
  • Inexpensive ($60).
  • Works with cell phones and other devices.
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The Windows-based PDA

  • Uses Windows-based Pocket PC 2002 Operating System.
  • Screen is highly visible in bright sun.
  • Most Windows-based PDA’s have this feature.


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The PDA - 2
  • Screen backlighting is automatically adjusted for both indoor and outdoor use.
  • Has both numeric and alphanumeric touch-screen data entry.


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The Old vs. the New
  • The GPS unit/battery pack
  • The Data Collection Unit
    • Old: DOS-based Proprietary System
    • New: Windows CE-based system
      • Pocket Word/Excel/Access
    • Solar Battery Recharger
      • Allows PDA to remain in the field for long periods of time.
    • Cost:  New system is MUCH cheaper.

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Conceptual Model
  • PC software – to create applications, to store the master data set.
  • PDA software– to run applications, collect field data, transfer data back to the PC.
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PDA to PC
  • PDA Data Entry Screens can have edit checks.
    • Menu – pick systems.
  • Data Can be Sent from the PC to the PDA for further updates.
    • Example: Census files that are updated quarterly.
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PC Client: Automated Data Dictionary
  • Part of GPS software
  • Creates a table for each feature.
  • Menus, other data entry features
  • Databases export directly to GIS with location data fields.
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Linking Map features to Databases
  • The Village, Compound, and House ID are painted on each study house.
  • The ID is recorded with the location data.
  • Data from any other study that uses these household ID numbers can then be linked to map locations.


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Transfer of Data from PDA to Desktop Computer
  • GPS to PC transfer
  • Calibration of GPS readings
  • Export data to GIS software
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Survey Data Collection
  • You can also use this system for collecting survey data.
  • All that is needed is the PDA and the solar battery recharger.
    • No GPS or Laser unit.
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Survey Data Collection
  • Can use a variety of other database development tools for the Pocket PC
  • All produce Access-compatible databases.
  • Can also use Visual Studio with Embedded tools for CE.
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Survey Data Collection
  • Only the CF card needs to be brought back from the field.
    • ID files on CF identifies the source of data to the Data Manager.
    • Software on PDA prevents incorrect CF installation.
    • ID written on CF identifies card to transport team.
    • CF card slides into a slot on the PDA.
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Survey Data Collection
  • Solar battery recharging allows unlimited field use.


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Projects Using PDA’s in Kenya:
  • GPS/Mapping of Asembo, and Gem.
  • Mapping/Census of Kisian for wash-durable net study.
  • Survey of 45 villages on bednet usage habits and condition.
  • Mapping/attributes of mosquito larval habitat in Asembo/Gem.
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Projects Using PDA’s in other countries:
  • Haiti : GPS mapping
  • for filariasis project.
  • Guatemala: Data
  • collection for malaria
  • surveillance in 26 villages.
  • American Samoa: GPS mapping/census for filariasis project.
  • Tanzania – Demographic surveillance – will be tested in 3 villages in early ’03.
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Pros for PDA-based data collection
  • Users really seem to like the system
  • Easy to train users – no nightmares to date.
  • Simple applications are very easy to develop and modify using a number of products.
    • Complex applications developed via Visual Studio
  • Has been used for approximately 10 projects of varying size and complexity.
  • Solar battery recharging system works very well.
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Con’s for PDA-based data collection
  • Expensive if there are a large number of data collectors .
    • If there are more than 15 data collectors, consider scanning systems.
  • Hardware and battery failures
    • Have an extra PDA or two on hand.  Use PDA’s with replaceable batteries if possible.
    • Not a major concern.  Only one project of 10 has experienced loss of field data.
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Staffing and Equipment
  • Three GPS technicians.
  • One base station ($10K) for differential GPS.
  • Three laser units ($3K each).   A compass and tape measure will work, too ($50, but is low-tech!).
  • The GPS units are $500 each, the PDA’s are $500 each (with cables), software is $800, the solar battery recharger is $60.
  • GIS software is $1K to $3K (additional modules).
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Odds Ratios for  Childhood Mortality by Distance
Darker Colors Mean More Protection
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Summary
  • Paperless data collection systems have worked well for relatively simple data collection projects.
    • We plan to use them in more sophisticated systems soon.
    • They also can have integrated GIS data collection capability.
  • These systems allow rapid collection of high quality data.
  • GIS systems can provide data that provide unique information of public health importance.