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An Integrated Platform for Describing
Comprehensive Family
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Relationships and Structural and Functional
Features of Proteins
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Classification Scheme: Superfamily/Family & Domain/Motif
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Superfamily/Family (Global): Full-Length Similarity with
Same
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Domain
Arrangement
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Domain/Motif (Local): Structural/Functional Units
& Sites
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Sequence and Family Data
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Non-Redundant,
Annotated PIR-PSD, Swiss-Prot, TrEMBL
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Sequences:
~827,000
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Superfamilies
(~36,000),
Families (>145,000), Domains (>3700),
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Motifs
(>1300),
Post-Translational
Modifications (>280)
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Superfamily
and Protein Summary Reports
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Modular Framework: Extensibility, Flexibility, Customization
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