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Non-Redundant REFerence Protein Sequence Database
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Comprehensiveness: PIR-PSD, Swiss-Prot, TrEMBL,
RefSeq,
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GenPept,
PDB
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Timeliness: Biweekly Updates (~ 1,000,000 Sequences)
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Non-Redundancy: by Sequence Identity &
Taxonomy (Species)
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Source Attribution: Protein IDs and Names
from Underlying
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Databases,
Sequence, Taxonomy, Bibliography
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Related Sequences: Identical Sequences from
Different Species,
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Complete
Substring, >=95% Sequence Identity
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Applications
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Protein
Identification: Full-Scale or Species-Based Sequence
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Analysis
and Text Search
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Detection
of Annotation Errors
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Development
of Protein Name Ontology
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FTP Distribution:
XML and FASTA Formats
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