PIR Integrated Resources and Data-Mining Tools for Functional Genomics and Proteomics

Functional Genomics and Proteomics

Protein Information Resource (PIR)

PIR Web Site (http://pir.georgetown.edu)

Protein Family Classification

Genome Sequence Annotation

Genome Era Challenges:
Transitive Catastrophe

PIR-NREF Database

PIR-NREF Report (I)

PIR-NREF Report (II)

PIR-NREF Database (http://pir.georgetown.edu/pirwww/search/pirnref.shtml)

PIR Searches (I)

PIR Searches (II)

Data Integration

iProClass Database

iProClass
Overview

iProClass - Sequence Report (I)

Bibliography Information Display

Functional Classification

KEGG Metabolic & Regulatory Pathways

DIP Protein-Protein Interactions

iProClass - Sequence Report (II)

Protein Structural Classification

PIR-RESID
Post-Translational Modification Database

iProClass - Superfamily Report

Integrated Protein Knowledge Base System

Integrated Knowledge
Base

Protein Informatics for Expression Analysis

Knowledge Base for
Functional Genomics & Proteomics

Acknowledgments